Cycle 2 Work Scheme – Late to cancel

I recently utilised the Cycle to Work scheme supported by my employer and decided to invest in a good electric bicycle. After receiving the details from the third party, I made the cycle purchase from a local (UK) bikestore that supports the scheme. In the purchase, I followed their guidance where I applied the voucher in full and paid the extra costs directly (as prompted by their web service) as the overall price was above the value of the voucher. However, a month later the company selling me the bike told me that I could not use the Cycle to Work scheme as one is not allowed to top-up the voucher. I attempted downscale or remove parts from the cycle, but that wasn't a feasible way to keep the cost under the voucher limit, so after going back and forth between me and the bicycle shop, the order was cancelled. They admitted they were wrong initially accepting it but wanted to follow the regulations. That's fine. However, my salary reduction is ticking off monthly and I am unable to cancel the scheme as one can only do the cancellation during the first 14 days (by which time I wasn't aware of the issue). I wonder what is the sensible way out of the situation?
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EDIT: In any case, if the shop accepted the voucher, surely they are now obliged to deliver on the bike, right?
That's really shoddy service from them, who was the retailer?
Marin Palisades Trail 91 and 06
Scott CR1 SL 12
Cannondale Synapse Adventure 15 & 16 Di2
Scott Foil 18
My memory is hazy but im sure there was a way of paying your employer the difference to share the liability. (Assuming 12 month) They would then take the full voucher amount divided by 12 as salary sacrifice and refund you your contribution monthly. I cant remember the tax implications.
I'd lay it on heavy with the shop, and if you can't get anywhere, ask them to send you a document to show you have X amount of credit (From the voucher) on your account with them.
Then in 10 months time, arrange a 2nd C2W amount, this then gets added to your account 'balance' thus enabling you to buy the ebike you actually want.
The shop would need to agree of course, but they made a mess up, so they should be willing to accommodate a request like this imho.
Bit strung out, but should get you there in the end.
Marin Palisades Trail 91 and 06
Scott CR1 SL 12
Cannondale Synapse Adventure 15 & 16 Di2
Scott Foil 18